IL_6ZU5_011

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_011 not in the Motif Atlas

Homologous match to IL_8C3A_029

Geometric discrepancy: 0.082

The information below is about IL_8C3A_029

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

6ZU5|1|L50|C|557
6ZU5|1|L50|C|558
6ZU5|1|L50|G|559
*
6ZU5|1|L50|C|692
6ZU5|1|L50|U|693
6ZU5|1|L50|G|694

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LAA

uL15

Chain LC0

uL4