IL_6ZU5_014

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GC*GGC

Length

5 nucleotides

Bulged bases

6ZU5|1|L50|G|614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_014 not in the Motif Atlas

Homologous match to IL_8C3A_032

Geometric discrepancy: 0.145

The information below is about IL_8C3A_032

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

6ZU5|1|L50|G|587
6ZU5|1|L50|C|588
*
6ZU5|1|L50|G|613
6ZU5|1|L50|G|614
6ZU5|1|L50|C|615

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LA0

uL2

Chain LPP

eL43

Chain LR0

eL19