IL_6ZU5_015

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_015 not in the Motif Atlas

Geometric match to IL_4V9F_027

Geometric discrepancy: 0.065

The information below is about IL_4V9F_027

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

24

Unit IDs

6ZU5|1|L50|C|588
6ZU5|1|L50|G|589
6ZU5|1|L50|A|590
6ZU5|1|L50|A|591
6ZU5|1|L50|G|592
*
6ZU5|1|L50|U|609
6ZU5|1|L50|G|610
6ZU5|1|L50|G|611
6ZU5|1|L50|A|612
6ZU5|1|L50|G|613

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LA0

uL2

Chain LPP

eL43

Chain LR0

eL19