IL_6ZU5_022

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGG*CU

Length

5 nucleotides

Bulged bases

6ZU5|1|L50|G|736

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_022 not in the Motif Atlas

Geometric match to IL_5TBW_037

Geometric discrepancy: 0.1465

The information below is about IL_5TBW_037

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

6ZU5|1|L50|A|735
6ZU5|1|L50|G|736
6ZU5|1|L50|G|737
*
6ZU5|1|L50|C|834
6ZU5|1|L50|U|835

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LBB

eL29

Chain LF0

uL30

Chain LT0

eL21