IL_6ZU5_038

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCG*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_038 not in the Motif Atlas

Geometric match to IL_6OL3_002

Geometric discrepancy: 0.1051

The information below is about IL_6OL3_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

6ZU5|1|L50|G|1093
6ZU5|1|L50|C|1094
6ZU5|1|L50|G|1095
*
6ZU5|1|L50|C|1129
6ZU5|1|L50|A|1130
6ZU5|1|L50|C|1131

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LC0

uL4

Chain LE0

eL6

Chain LEE

eL32