IL_6ZU5_039
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGCAGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 6ZU5|1|L50|A|1100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_039 not in the Motif Atlas
- Homologous match to IL_5TBW_059
- Geometric discrepancy: 0.1624
- The information below is about IL_5TBW_059
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.5
- Basepair signature
- cWW-cWW-tSS-tSH-tHS-cWW-tHS
- Number of instances in this motif group
- 32
Unit IDs
6ZU5|1|L50|C|1097
6ZU5|1|L50|G|1098
6ZU5|1|L50|C|1099
6ZU5|1|L50|A|1100
6ZU5|1|L50|G|1101
6ZU5|1|L50|A|1102
6ZU5|1|L50|A|1103
6ZU5|1|L50|G|1104
*
6ZU5|1|L50|U|1123
6ZU5|1|L50|G|1124
6ZU5|1|L50|G|1125
6ZU5|1|L50|A|1126
6ZU5|1|L50|G|1127
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LC0
- uL4
- Chain LE0
- eL6
- Chain LEE
- eL32
- Chain LY0
- uL24
Coloring options: