IL_6ZU5_066

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

6ZU5|1|L50|A|2199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_066 not in the Motif Atlas

Homologous match to IL_5TBW_094

Geometric discrepancy: 0.0843

The information below is about IL_5TBW_094

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

6ZU5|1|L50|G|1881
6ZU5|1|L50|A|1882
*
6ZU5|1|L50|U|2198
6ZU5|1|L50|A|2199
6ZU5|1|L50|C|2200
6ZU5|1|L50|C|2201

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LA0

uL2