IL_6ZU5_067

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

6ZU5|1|L50|G|2003

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_067 not in the Motif Atlas

Homologous match to IL_8C3A_100

Geometric discrepancy: 0.1521

The information below is about IL_8C3A_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38958.10

Basepair signature

cWW-cWW-cWW-tHS

Number of instances in this motif group

9

Unit IDs

6ZU5|1|L50|U|1892
6ZU5|1|L50|A|1893
6ZU5|1|L50|G|1894
*
6ZU5|1|L50|U|2001
6ZU5|1|L50|G|2002
6ZU5|1|L50|G|2003
6ZU5|1|L50|G|2004

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LA0

uL2

Chain LN0

eL15

Chain LOO

eL42