IL_6ZU5_068

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGU*AGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_068 not in the Motif Atlas

Geometric match to IL_3CZW_002

Geometric discrepancy: 0.1017

The information below is about IL_3CZW_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

6ZU5|1|L50|U|1895
6ZU5|1|L50|G|1896
6ZU5|1|L50|U|1897
*
6ZU5|1|L50|A|1998
6ZU5|1|L50|G|1999
6ZU5|1|L50|A|2000

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LA0

uL2

Chain LN0

eL15

Chain LOO

eL42