IL_6ZU5_073

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCA*UC

Length

5 nucleotides

Bulged bases

6ZU5|1|L50|C|2164

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_073 not in the Motif Atlas

Geometric match to IL_3SNP_003

Geometric discrepancy: 0.3505

The information below is about IL_3SNP_003

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

6ZU5|1|L50|G|2163
6ZU5|1|L50|C|2164
6ZU5|1|L50|A|2165
*
6ZU5|1|L50|U|2177
6ZU5|1|L50|C|2178

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LAA

uL15

Chain LII

eL36

Chain LOO

eL42

Chain LQ0

eL18