IL_6ZU5_077

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCAAG*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_077 not in the Motif Atlas

Homologous match to IL_8C3A_114

Geometric discrepancy: 0.1077

The information below is about IL_8C3A_114

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65585.1

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6ZU5|1|L50|C|2226
6ZU5|1|L50|C|2227
6ZU5|1|L50|A|2228
6ZU5|1|L50|A|2229
6ZU5|1|L50|G|2230
*
6ZU5|1|L50|C|2240
6ZU5|1|L50|G|2241
6ZU5|1|L50|A|2242
6ZU5|1|L50|C|2243
6ZU5|1|L50|G|2244

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LI0

uL16

Chain LMM

eL40