IL_6ZU5_080

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CU*AACG

Length

6 nucleotides

Bulged bases

6ZU5|1|L50|A|2332, 6ZU5|1|L50|C|2333

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_080 not in the Motif Atlas

Homologous match to IL_5TBW_109

Geometric discrepancy: 0.0953

The information below is about IL_5TBW_109

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

6ZU5|1|L50|C|2272
6ZU5|1|L50|U|2273
*
6ZU5|1|L50|A|2331
6ZU5|1|L50|A|2332
6ZU5|1|L50|C|2333
6ZU5|1|L50|G|2334

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LO0

uL13

Chain LV0

uL14