IL_6ZU5_084

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_084 not in the Motif Atlas

Geometric match to IL_7A0S_107

Geometric discrepancy: 0.2593

The information below is about IL_7A0S_107

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_71625.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

95

Unit IDs

6ZU5|1|L50|C|2394
6ZU5|1|L50|C|2395
6ZU5|1|L50|G|2396
*
6ZU5|1|L50|C|2524
6ZU5|1|L50|C|2525
6ZU5|1|L50|G|2526

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LO0

uL13