IL_6ZU5_089

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

6ZU5|1|L50|A|2624

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_089 not in the Motif Atlas

Homologous match to IL_8C3A_137

Geometric discrepancy: 0.274

The information below is about IL_8C3A_137

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

6ZU5|1|L50|G|2577
6ZU5|1|L50|C|2578
*
6ZU5|1|L50|G|2623
6ZU5|1|L50|A|2624
6ZU5|1|L50|C|2625

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LDD

eL31