IL_6ZU5_096
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AACCC*GAUCU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_096 not in the Motif Atlas
- Geometric match to IL_4V9F_104
- Geometric discrepancy: 0.0965
- The information below is about IL_4V9F_104
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.13
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 13
Unit IDs
6ZU5|1|L70|A|32
6ZU5|1|L70|A|33
6ZU5|1|L70|C|34
6ZU5|1|L70|C|35
6ZU5|1|L70|C|36
*
6ZU5|1|L70|G|41
6ZU5|1|L70|A|42
6ZU5|1|L70|U|43
6ZU5|1|L70|C|44
6ZU5|1|L70|U|45
Current chains
- Chain L70
- 5S rRNA
Nearby chains
- Chain L50
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD0
- uL18
- Chain LJ0
- uL5
Coloring options: