IL_6ZU9_010
3D structure
- PDB id
- 6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 48S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UUAUUU*AUUCA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU9_010 not in the Motif Atlas
- Homologous match to IL_4V88_393
- Geometric discrepancy: 0.0871
- The information below is about IL_4V88_393
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
6ZU9|1|2|U|117
6ZU9|1|2|U|118
6ZU9|1|2|A|119
6ZU9|1|2|U|120
6ZU9|1|2|U|121
6ZU9|1|2|U|122
*
6ZU9|1|2|A|295
6ZU9|1|2|U|296
6ZU9|1|2|U|297
6ZU9|1|2|C|298
6ZU9|1|2|A|299
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain S
- 40S ribosomal protein S4-A
- Chain V
- 40S ribosomal protein S8-A
Coloring options: