IL_6ZU9_016
3D structure
- PDB id
- 6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 48S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- AAU*AU
- Length
- 5 nucleotides
- Bulged bases
- 6ZU9|1|2|A|266
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU9_016 not in the Motif Atlas
- Homologous match to IL_4V88_399
- Geometric discrepancy: 0.1291
- The information below is about IL_4V88_399
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
6ZU9|1|2|A|265
6ZU9|1|2|A|266
6ZU9|1|2|U|267
*
6ZU9|1|2|A|288
6ZU9|1|2|U|289
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain S
- 40S ribosomal protein S4-A
- Chain T
- 40S ribosomal protein S6-A
Coloring options: