IL_6ZU9_082
3D structure
- PDB id
- 6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 48S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 6ZU9|1|2|A|1756
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU9_082 not in the Motif Atlas
- Geometric match to IL_3WBM_002
- Geometric discrepancy: 0.297
- The information below is about IL_3WBM_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
6ZU9|1|2|C|1644
6ZU9|1|2|G|1645
6ZU9|1|2|C|1646
6ZU9|1|2|U|1647
*
6ZU9|1|2|A|1753
6ZU9|1|2|A|1754
6ZU9|1|2|A|1755
6ZU9|1|2|A|1756
6ZU9|1|2|G|1757
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 3
- mRNA
- Chain A
- Eukaryotic translation initiation factor 1A
- Chain c
- 40S ribosomal protein S23-A
- Chain m
- Eukaryotic translation initiation factor 5
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