IL_6ZV6_037
3D structure
- PDB id
- 6ZV6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 6ZV6|1|2|A|668
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZV6_037 not in the Motif Atlas
- Geometric match to IL_4LFB_022
- Geometric discrepancy: 0.1209
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
6ZV6|1|2|G|665
6ZV6|1|2|U|666
6ZV6|1|2|U|667
6ZV6|1|2|A|668
6ZV6|1|2|A|669
6ZV6|1|2|A|670
6ZV6|1|2|A|671
*
6ZV6|1|2|U|1161
6ZV6|1|2|C|1162
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C
- 40S ribosomal protein S2
- Chain X
- 40S ribosomal protein S23
- Chain a
- 40S ribosomal protein S26
Coloring options: