IL_6ZVI_066
3D structure
- PDB id
- 6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mbf1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 6ZVI|1|h|C|1274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZVI_066 not in the Motif Atlas
- Homologous match to IL_4V88_450
- Geometric discrepancy: 0.1062
- The information below is about IL_4V88_450
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.2
- Basepair signature
- cWW-L-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6ZVI|1|h|U|1272
6ZVI|1|h|G|1273
6ZVI|1|h|C|1274
6ZVI|1|h|A|1275
6ZVI|1|h|U|1276
*
6ZVI|1|h|A|1436
6ZVI|1|h|U|1437
6ZVI|1|h|G|1438
Current chains
- Chain h
- 18S rRNA
Nearby chains
- Chain C
- RPS20 isoform 1
- Chain O
- RPS29A isoform 1
- Chain T
- MBF1 isoform 1
- Chain d
- Transfer RNA; tRNA
- Chain f
- mRNA
- Chain l
- RPS3 isoform 1
- Chain s
- 40S ribosomal protein S10-A
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