IL_6ZVI_089

3D structure

PDB id

6ZVI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mbf1-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCUAACCUUGAGUC*GGCUCUUGGCGAAC

Length

28 nucleotides

Bulged bases

6ZVI|1|h|G|729, 6ZVI|1|h|G|732, 6ZVI|1|h|A|733

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZVI|1|h|G|703
6ZVI|1|h|C|704
6ZVI|1|h|U|705
6ZVI|1|h|A|706
6ZVI|1|h|A|707
6ZVI|1|h|C|708
6ZVI|1|h|C|709
6ZVI|1|h|U|710
6ZVI|1|h|U|711
6ZVI|1|h|G|712
6ZVI|1|h|A|713
6ZVI|1|h|G|714
6ZVI|1|h|U|715
6ZVI|1|h|C|716
*
6ZVI|1|h|G|722
6ZVI|1|h|G|723
6ZVI|1|h|C|724
6ZVI|1|h|U|725
6ZVI|1|h|C|726
6ZVI|1|h|U|727
6ZVI|1|h|U|728
6ZVI|1|h|G|729
6ZVI|1|h|G|730
6ZVI|1|h|C|731
6ZVI|1|h|G|732
6ZVI|1|h|A|733
6ZVI|1|h|A|734
6ZVI|1|h|C|735

Current chains

Chain h

18S rRNA

Nearby chains

Chain m

40S ribosomal protein S4-A