IL_6ZVI_092

3D structure

PDB id

6ZVI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mbf1-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUAGUGAGGCC*GGACAAACUUGG

Length

24 nucleotides

Bulged bases

6ZVI|1|h|U|1666, 6ZVI|1|h|A|1667, 6ZVI|1|h|G|1668, 6ZVI|1|h|U|1669, 6ZVI|1|h|G|1670, 6ZVI|1|h|A|1730, 6ZVI|1|h|A|1732, 6ZVI|1|h|G|1736

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZVI|1|h|C|1664
6ZVI|1|h|U|1665
6ZVI|1|h|U|1666
6ZVI|1|h|A|1667
6ZVI|1|h|G|1668
6ZVI|1|h|U|1669
6ZVI|1|h|G|1670
6ZVI|1|h|A|1671
6ZVI|1|h|G|1672
6ZVI|1|h|G|1673
6ZVI|1|h|C|1674
6ZVI|1|h|C|1675
*
6ZVI|1|h|G|1726
6ZVI|1|h|G|1727
6ZVI|1|h|A|1728
6ZVI|1|h|C|1729
6ZVI|1|h|A|1730
6ZVI|1|h|A|1731
6ZVI|1|h|A|1732
6ZVI|1|h|C|1733
6ZVI|1|h|U|1734
6ZVI|1|h|U|1735
6ZVI|1|h|G|1736
6ZVI|1|h|G|1737

Current chains

Chain h

18S rRNA

Nearby chains

Chain o

40S ribosomal protein S6-A

Chain q

40S ribosomal protein S8-A