IL_6ZXH_040
3D structure
- PDB id
- 6ZXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- G(PSU)U*AAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZXH_040 not in the Motif Atlas
- Geometric match to IL_2O3X_001
- Geometric discrepancy: 0.2088
- The information below is about IL_2O3X_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_61702.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ZXH|1|2|G|680
6ZXH|1|2|PSU|681
6ZXH|1|2|U|682
*
6ZXH|1|2|A|1023
6ZXH|1|2|A|1024
6ZXH|1|2|U|1025
Current chains
- Chain 2
- pre-18S ribosomal RNA
Nearby chains
- Chain L
- 40S ribosomal protein S11
- Chain N
- 40S ribosomal protein S13
- Chain W
- 40S ribosomal protein S15a
- Chain X
- 40S ribosomal protein S23
Coloring options: