IL_7A09_091

3D structure

PDB id

7A09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCC*GCGC

Length

7 nucleotides

Bulged bases

7A09|1|2|C|1783

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A09_091 not in the Motif Atlas

Homologous match to IL_4V88_475

Geometric discrepancy: 0.3565

The information below is about IL_4V88_475

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

7A09|1|2|G|1749
7A09|1|2|C|1750
7A09|1|2|C|1751
*
7A09|1|2|G|1782
7A09|1|2|C|1783
7A09|1|2|G|1784
7A09|1|2|C|1785

Current chains

Chain 2

18S ribosomal RNA

Nearby chains