IL_7A09_119
3D structure
- PDB id
- 7A09 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human ABCE1-bound 43S pre-initiation complex - State III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- ACUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- 7A09|1|2|C|1403, 7A09|1|2|U|1404
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A09_119 not in the Motif Atlas
- Homologous match to IL_8CRE_481
- Geometric discrepancy: 0.3955
- The information below is about IL_8CRE_481
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78800.2
- Basepair signature
- cWW-cSH-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
7A09|1|2|A|1402
7A09|1|2|C|1403
7A09|1|2|U|1404
7A09|1|2|A|1405
*
7A09|1|2|U|1441
7A09|1|2|U|1442
7A09|1|2|C|1443
7A09|1|2|U|1444
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain V
- Receptor of activated protein C kinase 1
- Chain b
- 40S ribosomal protein S3
- Chain g
- 40S ribosomal protein S16
- Chain h
- 40S ribosomal protein S20
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