IL_7A0S_004

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

ACGAG*CUUUGACU

Length

13 nucleotides

Bulged bases

7A0S|1|X|U|99

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_94910.1

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

7A0S|1|X|A|80
7A0S|1|X|C|81
7A0S|1|X|G|82
7A0S|1|X|A|83
7A0S|1|X|G|84
*
7A0S|1|X|C|96
7A0S|1|X|U|97
7A0S|1|X|U|98
7A0S|1|X|U|99
7A0S|1|X|G|100
7A0S|1|X|A|101
7A0S|1|X|C|102
7A0S|1|X|U|103

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain R

50S ribosomal protein L24

Chain V

50S ribosomal protein L29