IL_7A0S_043

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CGGAGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7A0S|1|X|A|1224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

7A0S|1|X|C|1221
7A0S|1|X|G|1222
7A0S|1|X|G|1223
7A0S|1|X|A|1224
7A0S|1|X|G|1225
7A0S|1|X|A|1226
7A0S|1|X|A|1227
7A0S|1|X|G|1228
*
7A0S|1|X|U|1247
7A0S|1|X|G|1248
7A0S|1|X|G|1249
7A0S|1|X|A|1250
7A0S|1|X|G|1251

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain N

50S ribosomal protein L20

Chain P

50S ribosomal protein L22