IL_7A0S_050

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UGGAG*CGUUGAAA

Length

13 nucleotides

Bulged bases

7A0S|1|X|G|1428, 7A0S|1|X|U|1601, 7A0S|1|X|G|1602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_28245.1

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7A0S|1|X|U|1426
7A0S|1|X|G|1427
7A0S|1|X|G|1428
7A0S|1|X|A|1429
7A0S|1|X|G|1430
*
7A0S|1|X|C|1598
7A0S|1|X|G|1599
7A0S|1|X|U|1600
7A0S|1|X|U|1601
7A0S|1|X|G|1602
7A0S|1|X|A|1603
7A0S|1|X|A|1604
7A0S|1|X|A|1605

Current chains

Chain X

RNA (2732-MER)

Nearby chains