Motif IL_28245.1 Version IL_28245.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-4 | 1-10 | 2-9 | 4-10 | 5-8 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_7A0S_050 | 7A0S | 0.0000 | 3 | Kink-turn | X | LSU rRNA | C | 1598 | G | 1599 | U | 1600 | A | 1603 | A | 1604 | A | 1605 | * | U | 1426 | G | 1427 | A | 1429 | G | 1430 | cWW | ntHS | cWW | |||
| 2 | IL_8B0X_068 | 8B0X | 0.7957 | 4 | a | LSU rRNA | C | 97 | G | 98 | U | 99 | A | 103 | A | 104 | C | 105 | * | G | 81 | U | 82 | A | 84 | G | 85 | ncsS | cWW | ntsS | tSs | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUUGAAA*UGGAG | 1 |
| CGUUAUAAC*GUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUUGAA*GGA | 1 |
| GUUAUAA*UAA | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Heat map statistics
- Min 0.80 | Avg 0.40 | Max 0.80
Coloring options: