IL_37129.1

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name for chain		1		2		3	break		4		5	1-2	1-5	2-5	3-4
1	IL_9AXU_024	9AXU	0.3947	0	Minor groove platform	2	LSU rRNA	G	807	U	808	U	809	*	A	783	C	784	ncSH	cWW		cWW
2	IL_3IWN_001	3IWN	0.4330	0	Minor groove platform	A	Cyclic di-GMP-I riboswitch	G	89	A	90	U	91	*	A	2	C	3		ncWW		cWW
3	IL_8CRE_447	8CRE	0.3293	0	Minor groove platform	CM	SSU rRNA	C	1445	A	1446	C	1447	*	G	1163	G	1164		cWW		cWW
4	IL_8B0X_041	8B0X	0.6331	0	Minor groove platform	A	SSU rRNA	C	1226	A	1227	C	1228	*	G	953	G	954		cWW		cWW
5	IL_9PN5_199	9PN5	0.3623	0	Minor groove platform	B5	SSU rRNA	C	1459	A	1460	C	1461	*	G	1178	G	1179		cWW		cWW
6	IL_9H3G_214	9H3G	0.3533	0	Minor groove platform	h1	SSU rRNA	C	1462	A	1463	C	1464	*	G	1179	G	1180		cWW		cWW
7	IL_9SUM_195	9SUM	0.3423	0	Minor groove platform (H)	CA	SSU rRNA	C	1435	A	1436	C	1437	*	G	1148	G	1149		cWW		cWW
8	IL_8GLP_254	8GLP	0.6212	0	Minor groove platform	S2	SSU rRNA	C	1521	A	1522	C	1523	*	G	1235	G	1236		cWW		cWW
9	IL_3K0J_002	3K0J	0.4368	0	Minor groove platform related	E	TPP riboswitch (THI element)	C	18	C	19	U	20	*	A	35	G	36	ncSH	cWW		cWW
10	IL_7TZS_003	7TZS	0.3305	0	Minor groove platform related	X	TPP riboswitch (THI element)	C	23	C	24	U	25	*	A	35	G	36	ncSH	cWW		cWW
11	IL_9E6Q_055	9E6Q	0.3081	0	Minor groove platform	1	LSU rRNA	C	1499	A	1500	C	1501	*	G	1488	G	1489	cSH	cWW		cWW
12	IL_8B0X_067	8B0X	0.3145	0	Minor groove platform	a	LSU rRNA	U	434	C	435	C	436	*	G	43	A	44	cSH	cWW		cWW
13	IL_9DFE_348	9DFE	0.3933	0	Minor groove platform	1A	LSU rRNA	U	434	C	435	C	436	*	G	42	A	43	cSH	cWW		cWW
14	IL_7A0S_003	7A0S	0.3691	0	Minor groove platform	X	LSU rRNA	U	447	C	448	C	449	*	G	42	A	43	cSH	cWW		cWW
15	IL_9E6Q_003	9E6Q	0.4051	0	Minor groove platform	1	LSU rRNA	G	466	U	467	C	468	*	G	35	C	36	cSH	cWW		cWW
16	IL_12CI_006	12CI	0.5795	0	Minor groove platform	B	DGR-1A aptamer	U	20	C	21	G	22	*	C	38	A	39	cSH	cWW		cWW
17	IL_12CJ_004	12CJ	0.4594	0	Minor groove platform	B	DGR-1B	U	18	C	19	G	20	*	C	36	A	37	cSH	cWW		cWW
18	IL_4R4V_001	4R4V	0.4069	0	Minor groove platform	A	VS ribozyme RNA	U	777	U	778	A	779	*	U	607	G	608		cWW		cWW
19	IL_9PN5_091	9PN5	0.2921	1	Minor groove platform	A1	LSU rRNA	U	2807	C	2809	C	2810	*	G	2412	A	2413	cSH	cWW		cWW
20	IL_8OI5_096	8OI5	0.3138	1	Minor groove platform	1	LSU rRNA	U	2779	C	2781	C	2782	*	G	2390	A	2391	cSH	cWW		cWW
21	IL_9H3G_103	9H3G	0.3598	1	Minor groove platform	A	LSU rRNA	U	2806	C	2808	C	2809	*	G	2410	A	2411	cSH	cWW		cWW
22	IL_9AXU_088	9AXU	0.3420	1	Minor groove platform	2	LSU rRNA	U	2902	C	2904	C	2905	*	G	2500	A	2501	cSH	cWW		cWW
23	IL_9SUM_087	9SUM	0.3633	1	Minor groove platform (H)	A	LSU rRNA	U	2707	C	2709	C	2710	*	G	2327	A	2328	cSH	cWW		cWW
24	IL_9E6Q_078	9E6Q	0.4699	1	Minor groove platform	1	LSU rRNA	U	2552	C	2554	OMC	2555	*	G	2190	A	2191	cSH	cWW		cWW
25	IL_8GLP_131	8GLP	0.4383	1	Minor groove platform	L5	LSU rRNA	U	4384	C	4386	C	4387	*	G	3916	A	3917	cSH	cWW		cWW
26	IL_8B0X_143	8B0X	0.4019	1	Minor groove platform	a	LSU rRNA	U	2442	C	2444	U	2445	*	A	2074	A	2075	cSH	cWW		cWW
27	IL_9DFE_081	9DFE	0.4052	1	Minor groove platform	1A	LSU rRNA	U	2438	C	2440	C	2441	*	G	2070	A	2071	cSH	cWW		cWW
28	IL_4WF9_081	4WF9	0.4092	1	Minor groove platform	X	LSU rRNA	U	2465	C	2467	C	2468	*	G	2097	A	2098	cSH	cWW		cWW
29	IL_4V9F_075	4V9F	0.3853	1	Minor groove platform	0	LSU rRNA	U	2473	C	2475	C	2476	*	G	2111	A	2112	cSH	cWW		cWW
30	IL_7A0S_076	7A0S	0.3825	1	Minor groove platform	X	LSU rRNA	U	2417	C	2419	C	2420	*	G	2053	A	2054	cSH	cWW		cWW
31	IL_8GLP_292	8GLP	0.3857	0	Minor groove platform	L5	LSU rRNA	U	1790	U	1791	PSU	1792	*	A	1737	A	1738	cSH	cWW	tHS	cWW
32	IL_7A0S_028	7A0S	0.2583	0	Minor groove platform	X	LSU rRNA	U	925	C	926	C	927	*	G	875	A	876	ncSH	cWW		cWW
33	IL_4WF9_032	4WF9	0.2662	0	Minor groove platform	X	LSU rRNA	U	958	C	959	C	960	*	G	907	A	908	cSH	cWW		cWW
34	IL_4V9F_034	4V9F	0.2310	0	Minor groove platform	0	LSU rRNA	U	1009	C	1010	C	1011	*	G	956	A	957	cSH	cWW		cWW
35	IL_9DFE_027	9DFE	0.2665	0	Minor groove platform	1A	LSU rRNA	U	913	C	914	C	915	*	G	862	A	863	cSH	cWW		cWW
36	IL_8OI5_017	8OI5	0.2665	1	Minor groove platform	1	LSU rRNA	C	439	U	440	G	442	*	C	487	G	488	cSH	cWW	tHS	cWW
37	IL_4LFB_038	4LFB	0.2788	0	Minor groove platform	A	SSU rRNA	C	1226	A	1227	C	1228	*	G	953	G	954		cWW	ntHS	cWW
38	IL_1U6B_007	1U6B	0.3575	0	Minor groove platform	B	197-MER	G	128	A	129	G	130	*	C	177	C	178	cSH	cWW	tHS	cWW
39	IL_6DTD_003	6DTD	0.3052	0	Minor groove platform	C	RNA (37-MER)	G	22	A	23	A	24	*	U	15	C	16	cSH	cWW	tHS	cWW
40	IL_5ML7_009	5ML7	0.2872	0	Minor groove platform	B	23S ribosomal RNA	C	2177	A	2178	G	2179	*	C	2201	G	2202		cWW	tHS	cWW
41	IL_2QWY_009	2QWY	0.2358	0	Minor groove platform	C	SAM-II riboswitch	U	40	A	41	G	42	*	C	23	A	24		cWW	tHS	cWW
42	IL_9C75_001	9C75	0.2733	0	Minor groove platform	R	Rev Response Element	U	35	A	36	C	37	*	G	9	G	10		cWW	ntHS	cWW
43	IL_8B0X_063	8B0X	0.2648	0	Minor groove platform	A	SSU rRNA	U	1440	A	1441	G	1442	*	C	1460	G	1461		cWW		cWW
44	IL_8GLP_092	8GLP	0.1982	0	Minor groove platform	L5	LSU rRNA	A	2477	C	2478	G	2479	*	C	2499	U	2500		cWW		cWW
45	IL_9H3G_045	9H3G	0.1425	0	Minor groove platform	A	LSU rRNA	U	1060	U	1061	PSU	1062	*	A	1008	A	1009	ncSH	cWW	tHS	cWW
46	IL_9PN5_038	9PN5	0.1343	0	Minor groove platform	A1	LSU rRNA	U	1050	U	1051	PSU	1052	*	A	997	A	998	cSH	cWW	tHS	cWW
47	IL_9SUM_038	9SUM	0.1261	0	Minor groove platform (H)	A	LSU rRNA	U	997	U	998	U	999	*	A	944	A	945	cSH	cWW	tHS	cWW
48	IL_9AXU_038	9AXU	0.1478	0	Minor groove platform	2	LSU rRNA	U	1082	U	1083	U	1084	*	A	1029	A	1030	ncSH	cWW	ntHS	cWW
49	IL_8OI5_042	8OI5	0.1177	0	Minor groove platform	1	LSU rRNA	U	1046	U	1047	U	1048	*	A	993	A	994	ncSH	cWW	ntHS	cWW
50	IL_6DLR_003	6DLR	0.0000	0	Minor groove platform	A	Guanidine-I riboswitch	C	39	U	40	G	41	*	C	21	G	22	cSH	cWW	tHS	cWW
51	IL_7MLW_004	7MLW	0.1111	0	Minor groove platform	F	Guanidine-I riboswitch	C	45	U	46	G	47	*	C	16	G	17	ncSH	cWW	tHS	cWW
52	IL_5T83_003	5T83	0.1388	0	Minor groove platform	A	Guanidine-I riboswitch	C	36	U	37	G	38	*	C	21	G	22	ncSH	cWW	ntHS	cWW
53	IL_9PN5_211	9PN5	0.2190	0	Minor groove platform	B5	SSU rRNA	C	1306	U	1307	G	1308	*	C	1317	G	1318	cSH	cWW	tHS	cWW
54	IL_8CRE_457	8CRE	0.2609	0	Minor groove platform	CM	SSU rRNA	C	1291	U	1292	G	1293	*	C	1302	G	1303	ncSW	cWW		cWW
55	IL_8GLP_263	8GLP	0.2613	0	Minor groove platform	S2	SSU rRNA	C	1363	U	1364	G	1365	*	C	1374	G	1375	cSH	cWW	tHS	cWW
56	IL_9H3G_224	9H3G	0.3071	0	Minor groove platform	h1	SSU rRNA	C	1307	U	1308	G	1309	*	C	1318	G	1319	cSH	cWW	tHS	cWW
57	IL_8GLP_218	8GLP	0.3105	0	Minor groove platform	S2	SSU rRNA	A	545	G	546	G	547	*	C	537	U	538	cSH	cWW	ncWW	ncWW

3D structures

Complete motif including flanking bases

Sequence	Counts
UACC*GA	10
CAC*GG	8
UCC*GA	7
CUG*CG	7
UU(PSU)*AA	3
UUU*AA	3
CCU*AG	2
UCG*CA	2
GUU*AC	1
GAU*AC	1
GUC*GC	1
UUA*UG	1
UAC(OMC)*GA	1
UACU*AA	1
CUUG*CG	1
GAG*CC	1
GAA*UC	1
CAG*CG	1
UAG*CA	1
UAC*GG	1
UAG*CG	1
ACG*CU	1
AGG*CU	1

Non-Watson-Crick part of the motif

Sequence	Counts
U*	16
A*	15
C*	12
AC*	12
UU*	1
G*	1

Release history

Release	4.14
Date	2026-09-09
Status	New id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Motif IL_37129.1 Version IL_37129.1 of this group appears in releases 4.14 to 4.14 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_37129.1 Version IL_37129.1 of this group appears in releases 4.14 to 4.14

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Csv

Json