IL_7A0S_096

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UCUCC*GGUAG

Length

10 nucleotides

Bulged bases

7A0S|1|X|U|2668, 7A0S|1|X|C|2669

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7A0S|1|X|U|2666
7A0S|1|X|C|2667
7A0S|1|X|U|2668
7A0S|1|X|C|2669
7A0S|1|X|C|2670
*
7A0S|1|X|G|2698
7A0S|1|X|G|2699
7A0S|1|X|U|2700
7A0S|1|X|A|2701
7A0S|1|X|G|2702

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain B

50S ribosomal protein L3

Chain K

50S ribosomal protein L17

Chain M

50S ribosomal protein L19