IL_7A0S_106
3D structure
- PDB id
- 7A0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S Deinococcus radiodurans ribosome bounded with mycinamicin I
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.22 Å
Loop
- Sequence
- CAAUGAUAC*GAAAAGUCG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Bacterial 5S Loop E
- Broad Annotation
- Loop E
- Motif group
- IL_56455.6
- Basepair signature
- cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
7A0S|1|Y|C|73
7A0S|1|Y|A|74
7A0S|1|Y|A|75
7A0S|1|Y|U|76
7A0S|1|Y|G|77
7A0S|1|Y|A|78
7A0S|1|Y|U|79
7A0S|1|Y|A|80
7A0S|1|Y|C|81
*
7A0S|1|Y|G|100
7A0S|1|Y|A|101
7A0S|1|Y|A|102
7A0S|1|Y|A|103
7A0S|1|Y|A|104
7A0S|1|Y|G|105
7A0S|1|Y|U|106
7A0S|1|Y|C|107
7A0S|1|Y|G|108
Current chains
- Chain Y
- RNA (122-MER)
Nearby chains
- Chain J
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L25
- Chain T
- 50S ribosomal protein L27
- Chain W
- 50S ribosomal protein L30
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
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