IL_7A1G_069
3D structure
- PDB id
- 7A1G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases (A, C, G, U)
- 1427A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A1G_069 not in the Motif Atlas
- Homologous match to IL_4V88_452
- Geometric discrepancy: 0.1327
- The information below is about IL_4V88_452
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 120
Unit IDs
7A1G|1|2|C|1280
7A1G|1|2|G|1281
*
7A1G|1|2|C|1426
7A1G|1|2|A|1427
7A1G|1|2|G|1428
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain A
- 40S ribosomal protein S3
- Chain F
- 40S ribosomal protein S16-A
- Chain K
- 40S ribosomal protein S20
- Chain M
- 40S ribosomal protein S29-A
- Chain R
- 40S ribosomal protein S2
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