IL_7A1G_089
3D structure
- PDB id
- 7A1G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGC*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A1G_089 not in the Motif Atlas
- Homologous match to IL_4V88_472
- Geometric discrepancy: 0.1217
- The information below is about IL_4V88_472
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7A1G|1|2|G|1672
7A1G|1|2|G|1673
7A1G|1|2|C|1674
*
7A1G|1|2|G|1727
7A1G|1|2|A|1728
7A1G|1|2|C|1729
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain T
- 40S ribosomal protein S6-A
- Chain V
- 40S ribosomal protein S8-A
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