IL_7A5F_007

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_007 not in the Motif Atlas

Geometric match to IL_4WF9_020

Geometric discrepancy: 0.1292

The information below is about IL_4WF9_020

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

7A5F|1|A3|C|1904
7A5F|1|A3|C|1905
7A5F|1|A3|G|1906
*
7A5F|1|A3|C|2016
7A5F|1|A3|U|2017
7A5F|1|A3|G|2018

Current chains

Chain A3

16S rRNA

Nearby chains

Chain F3

39S ribosomal protein L4, mitochondrial

Chain M3

39S ribosomal protein L15, mitochondrial

Chain i3

39S ribosomal protein L51, mitochondrial