IL_7A5F_031

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GC*GUAU

Length

6 nucleotides

Bulged bases

7A5F|1|A3|U|2628, 7A5F|1|A3|A|2629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_031 not in the Motif Atlas

Geometric match to IL_7V9E_001

Geometric discrepancy: 0.2508

The information below is about IL_7V9E_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7A5F|1|A3|G|2596
7A5F|1|A3|C|2597
*
7A5F|1|A3|G|2627
7A5F|1|A3|U|2628
7A5F|1|A3|A|2629
7A5F|1|A3|U|2630

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 24

Transfer RNA; tRNA

Chain d6

Aurora kinase A-interacting protein