IL_7A5F_035

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AUG*CU

Length

5 nucleotides

Bulged bases

7A5F|1|A3|U|2731

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_035 not in the Motif Atlas

Homologous match to IL_7RQB_080

Geometric discrepancy: 0.0835

The information below is about IL_7RQB_080

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.16

Basepair signature

cWW-L-cWW

Number of instances in this motif group

116

Unit IDs

7A5F|1|A3|A|2730
7A5F|1|A3|U|2731
7A5F|1|A3|G|2732
*
7A5F|1|A3|C|2929
7A5F|1|A3|U|2930

Current chains

Chain A3

16S rRNA

Nearby chains

Chain F3

39S ribosomal protein L4, mitochondrial

Chain M3

39S ribosomal protein L15, mitochondrial