IL_7A5F_041

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_041 not in the Motif Atlas

Geometric match to IL_4OQU_002

Geometric discrepancy: 0.1729

The information below is about IL_4OQU_002

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.7

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

40

Unit IDs

7A5F|1|A3|G|2941
7A5F|1|A3|C|2942
*
7A5F|1|A3|G|2983
7A5F|1|A3|A|2984
7A5F|1|A3|C|2985

Current chains

Chain A3

16S rRNA

Nearby chains

Chain E3

39S ribosomal protein L3, mitochondrial

Chain N3

39S ribosomal protein L16, mitochondrial

Chain o3

Ribosomal protein 63, mitochondrial