IL_7A5F_047

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AUC*GUGAU

Length

8 nucleotides

Bulged bases

7A5F|1|A3|G|3063, 7A5F|1|A3|A|3064

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_047 not in the Motif Atlas

Geometric match to IL_7RQB_097

Geometric discrepancy: 0.1722

The information below is about IL_7RQB_097

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_90933.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

11

Unit IDs

7A5F|1|A3|A|2997
7A5F|1|A3|U|2998
7A5F|1|A3|C|2999
*
7A5F|1|A3|G|3061
7A5F|1|A3|U|3062
7A5F|1|A3|G|3063
7A5F|1|A3|A|3064
7A5F|1|A3|U|3065

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 03

39S ribosomal protein L32, mitochondrial

Chain E3

39S ribosomal protein L3, mitochondrial