IL_7A5F_048

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

7A5F|1|A3|A|3059, 7A5F|1|A3|C|3060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_048 not in the Motif Atlas

Homologous match to IL_5J7L_341

Geometric discrepancy: 0.1414

The information below is about IL_5J7L_341

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

7A5F|1|A3|C|2999
7A5F|1|A3|A|3000
*
7A5F|1|A3|U|3058
7A5F|1|A3|A|3059
7A5F|1|A3|C|3060
7A5F|1|A3|G|3061

Current chains

Chain A3

16S rRNA

Nearby chains

Chain E3

39S ribosomal protein L3, mitochondrial

Chain K3

39S ribosomal protein L13, mitochondrial