IL_7A5F_055

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

UAG*UCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_055 not in the Motif Atlas

Geometric match to IL_6IA2_004

Geometric discrepancy: 0.2663

The information below is about IL_6IA2_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7A5F|1|A6|U|678
7A5F|1|A6|A|679
7A5F|1|A6|G|680
*
7A5F|1|A6|U|925
7A5F|1|A6|C|926
7A5F|1|A6|A|927

Current chains

Chain A6

12S rRNA

Nearby chains

Chain J6

28S ribosomal protein S12, mitochondrial

Chain O6

28S ribosomal protein S18b, mitochondrial