IL_7A5F_056

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AAG*CUAU

Length

7 nucleotides

Bulged bases

7A5F|1|A6|A|864

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_056 not in the Motif Atlas

Geometric match to IL_5ML7_010

Geometric discrepancy: 0.3248

The information below is about IL_5ML7_010

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

7A5F|1|A6|A|689
7A5F|1|A6|A|690
7A5F|1|A6|G|691
*
7A5F|1|A6|C|862
7A5F|1|A6|U|863
7A5F|1|A6|A|864
7A5F|1|A6|U|865

Current chains

Chain A6

12S rRNA

Nearby chains

Chain M6

28S ribosomal protein S16, mitochondrial

Chain T6

28S ribosomal protein S25, mitochondrial