IL_7A5F_064

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

UUU*AA

Length

5 nucleotides

Bulged bases

7A5F|1|A6|U|835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_064 not in the Motif Atlas

Geometric match to IL_5J7L_017

Geometric discrepancy: 0.3784

The information below is about IL_5J7L_017

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

7A5F|1|A6|U|834
7A5F|1|A6|U|835
7A5F|1|A6|U|836
*
7A5F|1|A6|A|859
7A5F|1|A6|A|860

Current chains

Chain A6

12S rRNA

Nearby chains

Chain M6

28S ribosomal protein S16, mitochondrial

Chain T6

28S ribosomal protein S25, mitochondrial