IL_7A5F_066

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

UA*UAA

Length

5 nucleotides

Bulged bases

7A5F|1|A6|A|855

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_066 not in the Motif Atlas

Geometric match to IL_2QUX_002

Geometric discrepancy: 0.2916

The information below is about IL_2QUX_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

7A5F|1|A6|U|842
7A5F|1|A6|A|843
*
7A5F|1|A6|U|854
7A5F|1|A6|A|855
7A5F|1|A6|A|856

Current chains

Chain A6

12S rRNA

Nearby chains

Chain M6

28S ribosomal protein S16, mitochondrial

Chain U6

28S ribosomal protein S26, mitochondrial