IL_7A5F_074

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CUA*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_074 not in the Motif Atlas

Geometric match to IL_3WBM_004

Geometric discrepancy: 0.3445

The information below is about IL_3WBM_004

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_81831.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7A5F|1|A6|C|1024
7A5F|1|A6|U|1025
7A5F|1|A6|A|1026
*
7A5F|1|A6|U|1033
7A5F|1|A6|G|1034

Current chains

Chain A6

12S rRNA

Nearby chains

Chain E6

28S ribosomal protein S6, mitochondrial

Chain P6

28S ribosomal protein S18c, mitochondrial

Chain Q6

28S ribosomal protein S21, mitochondrial

Chain c6

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1