IL_7A5F_089
3D structure
- PDB id
- 7A5F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- GCAAA*UAAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A5F_089 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.2957
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7A5F|1|A6|G|1277
7A5F|1|A6|C|1278
7A5F|1|A6|A|1279
7A5F|1|A6|A|1280
7A5F|1|A6|A|1281
*
7A5F|1|A6|U|1302
7A5F|1|A6|A|1303
7A5F|1|A6|A|1304
7A5F|1|A6|G|1305
7A5F|1|A6|C|1306
Current chains
- Chain A6
- 12S rRNA
Nearby chains
- Chain B6
- 28S ribosomal protein S2, mitochondrial
- Chain C6
- 28S ribosomal protein S24, mitochondrial
- Chain D6
- 28S ribosomal protein S5, mitochondrial
- Chain G6
- 28S ribosomal protein S9, mitochondrial
- Chain b6
- 28S ribosomal protein S35, mitochondrial
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