IL_7A5F_096

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CAAGU*AUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5F_096 not in the Motif Atlas

Geometric match to IL_2R8S_002

Geometric discrepancy: 0.3302

The information below is about IL_2R8S_002

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.6

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

7A5F|1|A6|C|1504
7A5F|1|A6|A|1505
7A5F|1|A6|A|1506
7A5F|1|A6|G|1507
7A5F|1|A6|U|1508
*
7A5F|1|A6|A|1550
7A5F|1|A6|U|1551
7A5F|1|A6|A|1552
7A5F|1|A6|G|1553

Current chains

Chain A6

12S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain L3

39S ribosomal protein L14, mitochondrial

Chain d6

Aurora kinase A-interacting protein