IL_7A5G_010

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

AAG*UAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5G_010 not in the Motif Atlas

Geometric match to IL_2H1M_003

Geometric discrepancy: 0.1955

The information below is about IL_2H1M_003

Detailed Annotation

Isolated cWH basepair

Broad Annotation

Isolated cWH basepair

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

7A5G|1|A3|A|1925
7A5G|1|A3|A|1926
7A5G|1|A3|G|1927
*
7A5G|1|A3|U|1977
7A5G|1|A3|A|1978
7A5G|1|A3|U|1979

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 23

39S ribosomal protein L34, mitochondrial

Chain 93

39S ribosomal protein L41, mitochondrial

Chain D3

39S ribosomal protein L2, mitochondrial