IL_7A5G_019

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

GUAG*CACC

Length

8 nucleotides

Bulged bases

7A5G|1|A3|A|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5G_019 not in the Motif Atlas

Geometric match to IL_5D8H_002

Geometric discrepancy: 0.1282

The information below is about IL_5D8H_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7A5G|1|A3|G|2170
7A5G|1|A3|U|2171
7A5G|1|A3|A|2172
7A5G|1|A3|G|2173
*
7A5G|1|A3|C|2187
7A5G|1|A3|A|2188
7A5G|1|A3|C|2189
7A5G|1|A3|C|2190

Current chains

Chain A3

16S rRNA

Nearby chains

Chain J3

39S ribosomal protein L11, mitochondrial

Chain N3

39S ribosomal protein L16, mitochondrial

Chain l3

39S ribosomal protein L54, mitochondrial