IL_7A5G_058

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

CAU*AG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5G_058 not in the Motif Atlas

Homologous match to IL_4LFB_004

Geometric discrepancy: 0.1447

The information below is about IL_4LFB_004

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

61

Unit IDs

7A5G|1|A6|C|698
7A5G|1|A6|A|699
7A5G|1|A6|U|700
*
7A5G|1|A6|A|823
7A5G|1|A6|G|824

Current chains

Chain A6

12S rRNA

Nearby chains

Chain U6

28S ribosomal protein S26, mitochondrial

Chain Z

Elongation factor Tu, mitochondrial